USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

USC-OGP 2-DE database  Search by                Maps             Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal World-2DPAGE Repository Exclude local DBs has only effect if a remote interface is selected

Searching in 'USC-OGP 2-DE database' for entry matching: Q5XKE5 USC-OGP 2-DE database:  Q5XKE5 Q5XKE5 General information about the entry View entry in simple text format Entry name K2C79_HUMAN Primary accession number Q5XKE5 Secondary accession number(s) Q7Z793 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=Keratin, type II cytoskeletal 79; AltName: Full=Cytokeratin-79; Short=CK-79; AltName: Full=Keratin-6-like; Short=Keratin-6L; AltName: Full=Keratin-79; Short=K79; AltName: Full=Type-II keratin Kb38;. Gene name Name=KRT79 Synonyms=K6L, KB38, KRT6L Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein UVEAL_MELANOMA_3-10 {UVEAL MELANOMA 3-10} Homo sapiens (Human)   map experimental info   UVEAL_MELANOMA_3-10 MAP LOCATIONS: SPOT OGP-1161: pI=5.44; Mw=49904 Cross-references UniProtKB/Swiss-Prot Q5XKE5; K2C79_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name K2C79_HUMAN Primary accession number Q5XKE5 Secondary accession number(s) Q6P465 Q7Z793 Sequence was last modified on  May 18, 2010 (version 2) Annotations were last modified on  March 15, 2017 (version 113) Name and origin of the protein Description RecName: Full=Keratin, type II cytoskeletal 79; AltName: Full=Cytokeratin-79; Short=CK-79; AltName: Full=Keratin-6-like; Short=Keratin-6L; AltName: Full=Keratin-79; Short=K79; AltName: Full=Type-II keratin Kb38; Gene name Name=KRT79 Synonyms=K6L, KB38, KRT6L Encoded on Name=KRT79; Synonyms=K6L, KB38, KRT6L Keywords Coiled coil; Complete proteome; Intermediate filament; Keratin; Polymorphism; Reference proteome. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL AJ564105; CAD91893.1; -; mRNA EMBL AC107016; -; NOT_ANNOTATED_CDS; Genomic_DNA EMBL CH471054; EAW96648.1; -; Genomic_DNA EMBL BC039148; AAH39148.1; -; mRNA EMBL BC063648; AAH63648.1; -; mRNA EMBL BK000976; DAA00403.1; -; Genomic_DNA CCDS CCDS8839.1; -; . RefSeq NP_787028.1; NM_175834.2; . UniGene Hs.711471; -; . ProteinModelPortal Q5XKE5; -; . SMR Q5XKE5; -; . BioGrid 130796; 22; . IntAct Q5XKE5; 27; . STRING 9606.ENSP00000328358; -; . iPTMnet Q5XKE5; -; . PhosphoSitePlus Q5XKE5; -; . SwissPalm Q5XKE5; -; . BioMuta KRT79; -; . DMDM 296434550; -; . EPD Q5XKE5; -; . PaxDb Q5XKE5; -; . PeptideAtlas Q5XKE5; -; . PRIDE Q5XKE5; -; . Ensembl ENST00000330553; ENSP00000328358; ENSG00000185640; . GeneID 338785; -; . KEGG hsa:338785; -; . UCSC uc001sbb.4; human; . CTD 338785; -; . GeneCards KRT79; -; . H-InvDB HIX0201906; -; . HGNC HGNC:28930; KRT79; . HPA HPA059347; -; . MIM 611160; gene; . neXtProt NX_Q5XKE5; -; . OpenTargets ENSG00000185640; -; . PharmGKB PA162393725; -; . eggNOG ENOG410IEK5; Eukaryota; . eggNOG ENOG410XUTQ; LUCA; . GeneTree ENSGT00760000118796; -; . HOGENOM HOG000230976; -; . HOVERGEN HBG013015; -; . InParanoid Q5XKE5; -; . KO K07605; -; . OMA HLYEMEL; -; . OrthoDB EOG091G09KR; -; . PhylomeDB Q5XKE5; -; . TreeFam TF317854; -; . Reactome R-HSA-6805567; Keratinization; . Reactome R-HSA-6809371; Formation of the cornified envelope; . GeneWiki KRT79; -; . GenomeRNAi 338785; -; . PRO PR:Q5XKE5; -; . Proteomes UP000005640; Chromosome 12; . Bgee ENSG00000185640; -; . CleanEx HS_KRT79; -; . ExpressionAtlas Q5XKE5; baseline and differential; . Genevisible Q5XKE5; HS; . GO GO:0005829; C:cytosol; TAS:Reactome; . GO GO:0070062; C:extracellular exosome; IDA:UniProtKB; . GO GO:0045095; C:keratin filament; IEA:InterPro; . GO GO:0019899; F:enzyme binding; IPI:UniProtKB; . GO GO:0005198; F:structural molecule activity; IEA:InterPro; . GO GO:0070268; P:cornification; TAS:Reactome; . GO GO:0031424; P:keratinization; TAS:Reactome; . InterPro IPR001664; IF; . InterPro IPR018039; Intermediate_filament_CS; . InterPro IPR032444; Keratin_2_head; . InterPro IPR003054; Keratin_II; . PANTHER PTHR23239; PTHR23239; 1; . Pfam PF00038; Filament; 1; . Pfam PF16208; Keratin_2_head; 2; . PRINTS PR01276; TYPE2KERATIN; . SMART SM01391; Filament; 1; . PROSITE PS00226; IF; 1; .

Gateways to other related servers

• The World-2DPAGE Constellation - Entry point to the world-wide 2-DPAGE resources.
• World-2DPAGE Repository - A public repository for gel-based proteomics data linked to protein identification published in the literature.
• World-2DPAGE Portal - A dynamic portal to query simultaneously world-wide gel-based proteomics databases.
• SWISS-2DPAGE - The Geneva Two-dimensional polyacrylamide gel electrophoresis database.
• ExPASy - The resources web server of the Swiss Institute of Bioinformatics

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